Monday, September 30, 2013

That IPCC report

I'm sort of waiting for the more detailed parts of the report to come out before talking much about it, but I note a couple of things:

*  Judith Curry's attitude is "They're not listening to me!  They've all gone mad! Mad I say!"  And she's now recommending people read David Rose on "the pause"!   Her credibility was already shot.  Now it's toast.  Burnt toast.  In fact, crumbs of black carbon which have to be sent off to forensics to see if it actually ever was bread.

Andrew Bolt, of course, recommends Curry (his current favourite of the bare handful of dissenting climate scientists out of the actual huge pool of scientists who work in the area.)  Bolt also notes:
It now predicts as little as 0.3 degrees of warming or 4.8 at most. Anything under 2 degrees would actually be good for us, meaning more rain and better crops — not that the IPCC mentions reassuring news.
Of course, he couldn't care less about being accurate, but the .3 degree estimate is based on the smallest emissions scenario considered (see page 25 of the report) - RCP 2.6 - which I am pretty sure would take a massive effort to achieve.  And, as is common amongst the climate stupid:  the ranges Bolt refers to end at 2100.

The world does not end then, but it appears to be something Bolt, and his small brained followers, appear unable to contemplate, even though he has kids of his own.

If Bolt wants to be honest on this topic, he might point out that the actual estimates he should rely on are those which are in accord with his idea that the world should burn as much carbon fuel as it likes - let's take scenario RCP 6, then.

It gives a range of likely increases (on top of what we already have) of 1.4 degrees to 3.1 by 2100.

Unless I am mistaken, even 1.4 degrees puts us over the (very arbitrary, and quite possibly still dangerous) 2 degree limit, given that we have already gone up about .8 degree.

So, the short message should be  that Andrew Bolt thinks you should believe him, and a handful of ideologically motivated contrarian scientists, and burn away and take the risk that global temperatures will increase to 2 to 4 degrees higher by the end of the century, setting the world on a steady course of massive sea rises and massive climate change. 

No thanks.


Sunday, September 29, 2013

The Putin-isation continues

Oh my gosh, it's spreading.

I didn't realise until I saw it on Insiders this morning:  the Putinisation of Australian government continued apace last week, and spread from its leader to its Foreign Minister in some "don't I look like a wrinklier Olivia Newtron Bomb, you old fella's who voted for Tony?" shots that turned up in the government PR machine known as the Murdoch press:

Foreign Minister Julie Bishop.

Makes me feel queasy, this does.  

Friday, September 27, 2013

Bat curry not a good idea

Toxic load: blue-green algae's role in motor neuron disease

This is really fascinating article about developments in understanding how certain naturally occurring toxins are linked to motor neuron disease.

For one thing, I didn't recall this:
Scientists have known for some time now that exposure to blue-green algae is linked to increased incidence of several neurodegenerative diseases. But the reason for the link has been a mystery until now.
Given that it's a reasonable guess that global warming will increase toxic blue-green algae blooms, I'm hardly encouraged.

But the rest of the article explains things such as how people in Guam who ate fruit bat curry soup were poisoning themselves.  Never heard that one before either, but Australia's outbreak of a deadly fruit bat borne virus had pretty much already convinced me not to eat bat, anywhere.

It's been hot

It really is an unusually hot spring in Queensland:
QUEENSLAND has sweltered through its hottest September day ever, with temperature records smashed in 30 towns across the state. 
 
The highest temperature recorded was 41.4 degrees Celsius at Taroom, west of Maryborough, while the mercury soared past 40 degrees in another eight localities.

Brisbane-based meteorologist Matthew Bass said Thursday's scorcher had rewritten the history books as many towns had records dating back more than 100 years.

``These are new records and some of these places have records dating back the late 1800s,'' he told AAP.

Roma, for instance, recorded a maximum of 40.1 degrees on Thursday - the highest since its weather station opened in 1889.

Longreach, Emerald, Moranbah, Dalby, Oakey and Toowoomba were also among the towns that sweated through their hottest September day.

A comment observed

One of the few relatively moderate, but nonetheless nearly always wrong, people at a certain blog that shall remain nameless writes tonight (in relation to Indonesia being quite aggro in its stance towards the Abbot government asylum seeker policy):
Their treatment of the Australian government is concerning. This is not the behaviour of a nation that wants to have good relations.
Gee, you don't think that Abbott and Morrison grandstanding  on the evening news with Generals  three times since the election and prattling on about military operations to deal with this alleged national emergency coming from Indonesia might be perceived as not being "behaviour of a nation that wants to have good relations, " do you?  Or a new foreign minister who specifically says she won't be asking their "permission", just seeking their understanding?

Of course,  there is strong contingent of nutters there (that blog) who think Indonesia needs to be put in its place.  Let's see how that pans out.  I have a fair idea as to which nation might be doing some backpedalling soon.

Thursday, September 26, 2013

In public health news...

Yes, it's time to re-visit that old favourite topic - sexually transmitted diseases (and how people manage not to take risks seriously.)

It's from Catalyst tonight, and it started with a bit of history that reinforced my puzzlement about how syphilis for centuries did not manage to stop people sleeping around: 
 Professor Basil Donovan
Syphilis used to kill more people every year - year in, year out - than HIV did in its worst ever year. And it did that for 400 years. Back in 1908, one in eight babies were said to be dying of syphilis in Melbourne.
It seems to me that such a devastating and relatively common disease ought to have featured more in the novels of the pre-antibiotic era; yet from my limited knowledge of the "classics", it's not that often a plot point.   I mean, how come when AIDs was at its height it was the subject of umpteen plays, movies, books, etc, yet people seemed to shrug off the mayhem syphilis was causing ever since it turned up in Europe?   Anyway, that's another post, perhaps...

Back at Catalyst, the whole point of the story was that it seems medical scientists are virtually at panic stations about the likely spread of antibiotic resistant gonorrhoea:

Professor Matt Cooper
For gonorrhoea, we've now got to the stage where we have one particular strain, H041, where we've only got one antibiotic that kind of works, and even that's not effective.

NARRATION
It's this - Ceftriaxone.

Dr Graham Phillips
So, what happens when that doesn't work anymore?

Professor Matt Cooper
You're screwed, pardon the pun. So we have no therapy left. And in 2011, in a sex worker from Japan, they isolated a Ceftriaxone-resistant gonorrhoea. So no antibiotics worked....


NARRATION
And the rogue Japanese strain is now here, as well as other cities around the world.

Professor Basil Donovan
You know, there's every possibility that within a couple of years that that strain of the organism could take over.

NARRATION
Untreatable gonorrhoea is not a nice prospect. It can cause infertility in women, and blindness, even in babies born to infected mothers. It can also spread through the body to the heart and bones. The bacteria are particularly clever at getting around our defences.
One of the links from the Catalyst web site is to a paper from 2012 co-authored by some of the Professors who appeared on the show. Here's the abstract, which pulls no punches:
From a once easily treatable infection, gonorrhoea has evolved into a challenging disease, which in future may become untreatable in certain circumstances. International spread of extensively drug-resistant gonococci would have severe public health implications. It seems clear that under the current treatment pressure from extended-spectrum cephalosporins, and owing to Neisseria gonorrhoeae's remarkable evolutionary adaptability, further rise of ceftriaxone-resistant strains around the world is inevitable. Simply increasing the doses of extended-spectrum cephalosporins will likely prove ineffective in the long run, and has been a lesson learnt for all single-agent therapies used for gonorrhoea to date. We recommend that dual therapy, especially those consisting of extended-spectrum cephalosporins and azithromycin, be adopted more widely and complemented by strengthening of antimicrobial resistance surveillance. Unless there is urgent action at international and local levels to combat the problem of N. gonorrhoeae antimicrobial resistance, we are in for gloomy times ahead in terms of gonorrhoea disease and control.
In the conclusion it is noted:
It is probably only a matter of time before extensively drug-resistant N. gonorrhoeae strains become widespread and treatment failures, particularly for pharyngeal gonorrhoea, become commonplace.  
Pharyngeal gonorrhoea?  Hard to say what would be more depressing, having an untreatable genital problem, or a throat infection that just would not go away.

Anyway, the end point is this:
Action is therefore urgently needed at local and international levels to combat the problem. We advise that government agencies take this threat seriously and provide urgently needed funds for increased research, surveillance activities and vaccine development.
Well, yes.  A vaccine would be a good idea for an untreatable form of infection, no? 

I see that it has been the subject of some research going back to at least the 1970's, but as the article at that last link shows, other diseases have been the subject of much greater effort in vaccine research.

It seems it's time for that to change....
  

Meatballs return

It seems that Cloudy With a Chance of Meatballs has a decent enough sequel.  Yay.

Who's been a naughty Education Minister, then?

Tony Abbott says Government has 'no plans' to scrap university amenities fee 

So, Chris Pyne was on a bit of a frolic of his own the other day, then?

I presume the wrath of Peta was upon him, perhaps.

Dare I predict:  Pyne will be a liability for this government.

Bill Gates saves the world?

Atomic Goal - 800 Years of Power From Waste - NYTimes.com

The technical problems with the Gates' sponsored "TerraPower" reactors sound daunting, but it's nice that he's trying, I guess.

I choose to believe it is important to believe in free will

Does non-belief in free will make us better or worse?

Wednesday, September 25, 2013

An observation

The new layout for Slate is awful. 

An unusual clarification

Why do people want to eat babies? Scientists explain.

True, it is a curious thing, the way people will interact with babies this way.  I have a vague recollection that CS Lewis even made a comment about it once.

It seems it's all to do with smell.

I am also amused that at the end of the story, the reporter has found it necessary to add this:
Based on responses to this story, I should probably make something absolutely clear: You should never attempt to actually eat a baby. 
The headline, subhead, and lead to this story are not meant be taken seriously. Together they are, in the parlance of journalism, "the thing that gets people to read the article."
There is never any excuse to harm a child. The impulse that I described in this article does not take the form of an urge to literally bite, chew, and digest a small infant.
Rather, in my experience at least, it arises in utterances such as, "Your baby is so cute I could just eat him all up!" and in behaviors such as placing the baby's toes against the lips and repeatedly uttering the syllable "nom," in an attempt to elicit a giggle from the baby. 
I realize now that such phrases and actions are not actually very common. Or normal.
Still, I hope that you will not only stand firm with me in refraining from infant cannibalism, but that you will also urge your friends, family members, and neighbors to do the same.
Nice sarcasm.

Meanwhile, in Palestine...

Man tortures mouse that ate wages | GulfNews.com

A strange story about what some find funny in Gaza.  But there are animal lovers in the Middle East, as one of the comments indicates:
You will have my curse and you will suffer to death what u have done to the poor creature who doesn't know anything. this is animal cruelty. What goes come around and very sure you will suffer the same. way. I believe my god and you will get what you have done to this innocent animal.

Unpleasant procedure discussed

Prostate biopsy blamed for preventable superbug deaths

A relative of mine recently had this biopsy, and I did wonder how high a risk for infection it must carry:
Melbourne urologist Jeremy Grummet said an increasing number of men were falling ill with superbug infections after prostate biopsies when there was a way to avoid them.

The surgeon at The Alfred, Epworth and Cabrini hospitals said the rise of multi-drug resistant bacteria known as superbugs meant the traditional path for a biopsy needle through a man's rectum was causing 2-5 per cent of patients to suffer a serious infection.

This meant at least 142 of the estimated 7125 men having the procedure in Victoria each year were being admitted to hospital for treatment within days of the test.
''We have studied statewide data and there have been two deaths in Victoria from this in the last five years,'' Mr Grummet said.

''Many patients require [intensive care unit] admission until the bacteria have been cleared and patients have lost fingers and toes due to the effects of septicaemia on blood flow.''

Mr Grummet said although the transrectal biopsy was the current standard of care used in 95 per cent of cases, it involved piercing the rectum wall with a needle on the way into the prostate, exposing the patient's bloodstream to bacteria in their rectum. This was a problem for men whose rectums were harbouring superbugs thought to be found in some waterways and foods, especially overseas where antibiotics are used in farming.

Heart stopping

Change of heart vital to stopping needless cardiac arrest deaths

Well, I didn't know this before:
Each year, about 3800 people have a cardiac arrest in NSW. A staggering 90 per cent of them don't survive. But, with these three measures in place, we can drastically improve the survival rates across NSW. We can save lives.

In the US city of Seattle, 48 per cent of out-of-hospital cardiac arrest victims survive. This is almost five times better than the rate in NSW.

Seattle has achieved this impressive feat by providing extensive CPR training to the public, rolling out a network of publicly accessible defibrillators and creating a cardiac arrest registry; the same measures the Australian Resuscitation Council NSW is asking to be implemented here.

Cardiac arrest accounts for 10 times more fatalities than road deaths. Yet while the road accident toll has been slashed in recent decades, cardiac arrest survival rates remain worryingly static. Our success in reducing road deaths shows what a tremendous impact a concerted, targeted and well-resourced public health campaign can have.

We know what we need to do to reduce hundreds of needless deaths each year from cardiac arrest. Now we just need the support of the government to do it.
He mentions Queensland and Victoria as being a bit more advanced than NSW in setting up a defibrillator network.  I must admit, I did see one somewhere recently and was a bit surprised.  They are all over the place in Japan, but I assumed that was just Japanese safety overkill, and did not realise that there may be known good outcomes in cities that have set up these programs.

Out of the blue

Christopher Pyne reveals university shake-up

I don't follow university education policy at all closely, but what I find interesting about this story (and the interview I just heard on the ABC) is that it appears the university sector pretty much had no idea that the coalition had plans along the lines that Pyne is indicating.

That's what you get for having pathetic media coverage of elections, I guess.  Ooh - here's Kevin taking a selfie!  Look, Tony's hugging a puppy!

Update:  I like Ken Parish's sarcastic take on this.

Update 2:  Seems I was being too harsh on the media about this.  Why should they ask a question about a policy which appeared already firmly in place?:

It was Abbott himself who said the Coalition needed to “purposefully, calmly and methodically” deliver on their election promises now that the Coalition has “won the trust of the Australian people.” The Coalition denied there would be a cap on university places in 2012; blatantly lied to the public on ABC’s 730: “We have no plans to restore the cap. We do believe that the more students who are doing university, the better”. Their Real Solutions manifesto stated: “we will strengthen higher education and encourage Australian of all ages to further their education.” Those newly announced plans prove otherwise.

Abbott accused Julia Gillard of being a liar by endlessly squawking her “there will be no carbon tax under a government I lead” quote, conveniently cutting off her repeated statements about carbon pricing. Funny, then, that the Coalition repeatedly lied to the Australian public , leading us to this Trojan horse surprise.

Tuesday, September 24, 2013

Annabel on the secrets at sea

Asylum seeker policy: we're all mad here 
 Mr Morrison now assures us that "operational reasons" preclude the timely release of information. Because I am operationally challenged, or perhaps because I have insufficient security clearance, I cannot understand how turning boats around in secret instead of in public creates a greater deterrent, operationally.

My best guess is that the removal of boat arrivals from the daily news, and the deletion of their struggles at sea from the national ledger, are calculated to deprive the people aboard those boats of the last hope they had; a vocal contingent of Australian citizens who still looked at them and felt sorry.
If ever there was a government policy that will soon be reversed, this is it.

A pity - I like their yoghurt

Tamar Valley Dairy in voluntary administration

So, how's the new anti-science, militarized, Murdoch approved, Tony Putin government going?


Still getting the Generals up on TV, I see.

Uncle Rupert, meanwhile, seems to be a pushover for a free dinner paid by people with more money than sense (namely, IPA members):



Oh, so he's a libertarian now?   Well, that'll explain (as well as the ditching of the younger, liberal wife, and being the wrong side of 80) the new found disbelief in climate change and pricing carbon.  

Sunday, September 22, 2013